STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX11Transcription factor SOX. (443 aa)    
Predicted Functional Partners:
ATF3
Cyclic AMP-dependent transcription factor ATF-3.
    
 
 0.616
PRDM16
PR domain zinc finger protein 16.
    
 0.560
FOXB1
Forkhead box protein B1.
   
  
 0.535
ASCL1
Achaete-scute homolog 1.
    
 
 0.524
ATOH7
Protein atonal homolog 7.
      
 0.522
PAX6
Paired box protein Pax-6 isoform X1.
   
 
 0.513
CTNNB1
Catenin beta-1 isoform X1.
    
 0.504
POU5F1
POU domain protein.
    
 0.482
POU5F2
POU domain protein.
    
 0.482
KLF6
Krueppel-like factor 6 isoform X1.
    
 0.480
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.