STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX9Transcription factor SOX-9 isoform X1. (512 aa)    
Predicted Functional Partners:
RUNX2
Runt-related transcription factor 2 isoform X2.
   
 0.981
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
    
 0.915
PRKACB
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.915
CTNNB1
Catenin beta-1 isoform X1.
    
 0.897
ACAN
LOW QUALITY PROTEIN: aggrecan core protein.
      
 0.829
COL2A1
Collagen alpha-1(II) chain.
    
 
 0.819
PAX6
Paired box protein Pax-6 isoform X1.
   
 
 0.768
PTF1A
Pancreas transcription factor 1 subunit alpha.
    
 
 0.757
CPA1
Carboxypeptidase A1 isoform X1.
      
 0.751
GFAP
Glial fibrillary acidic protein isoform X1; Belongs to the intermediate filament family.
   
 
 0.734
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.