STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)    
Predicted Functional Partners:
PAIP1
Polyadenylate-binding protein-interacting protein 1 isoform X1.
   
 0.992
EIF4E
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.985
UPF1
Regulator of nonsense transcripts 1.
   
 0.976
EIF4B
Eukaryotic translation initiation factor 4B isoform X1.
   
 0.972
EIF4H
Eukaryotic translation initiation factor 4H isoform X1.
   
 0.943
SMG5
Protein SMG5.
    
 0.942
SMG7
Protein SMG7 isoform X1.
    
 0.942
SMG6
Telomerase-binding protein EST1A.
    
 0.936
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1 isoform X1.
   
 0.931
HSPA8
Heat shock cognate 71 kDa protein isoform X1; Belongs to the heat shock protein 70 family.
   
 0.903
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.