STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJB5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (273 aa)    
Predicted Functional Partners:
VSIG1
V-set and immunoglobulin domain-containing protein 1.
      
 0.724
PPP5C
Serine/threonine-protein phosphatase.
      
 0.706
TM4SF20
Transmembrane 4 L6 family member 20.
      
 0.608
TNS4
Tensin-4.
   
  
 0.536
SFMBT1
Scm-like with four MBT domains protein 1.
      
 0.526
GPA33
Cell surface A33 antigen.
      
 0.523
BTBD7
BTB/POZ domain-containing protein 7 isoform X1.
      
 0.495
GJB3
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
 
0.485
RABAC1
PRA1 family protein.
      
 0.454
SHROOM3
Protein Shroom3.
      
 0.453
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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