STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK40Serine/threonine-protein kinase 40. (435 aa)    
Predicted Functional Partners:
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
  
 0.738
VAC14
Protein VAC14 homolog.
   
 
 0.728
CTC1
CST complex subunit CTC1.
      
 0.722
RFWD2
E3 ubiquitin-protein ligase RFWD2 isoform X1.
    
 
 0.718
DNAJB4
dnaJ homolog subfamily B member 4.
   
 
 0.718
YARS
Tyrosine--tRNA ligase.
      
 0.711
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.701
TRIB1
Tribbles homolog 1.
    
 
0.647
TRIB3
Tribbles homolog 3.
    
 
0.597
DET1
DET1 homolog.
    
 
 0.586
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.