STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25E3 ubiquitin-protein ligase RNF25 isoform X1. (457 aa)    
Predicted Functional Partners:
UBE2D2
Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.725
PSMA6
Proteasome subunit alpha type.
      
 0.723
LSM7
U6 snRNA-associated Sm-like protein LSm7.
      
 0.721
RNF11
RING finger protein 11.
      
 0.712
MINK1
Misshapen-like kinase 1.
      
 0.647
PSME1
Proteasome activator complex subunit 1 isoform X1.
      
 0.643
ABI2
Abl interactor 2 isoform X1.
      
 0.621
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
      
 0.620
SNAPIN
SNARE-associated protein Snapin.
      
 0.605
GIT2
ARF GTPase-activating protein GIT2 isoform X1.
      
 0.603
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.