STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC4Zinc finger CCHC domain-containing protein 4 isoform X1. (513 aa)    
Predicted Functional Partners:
METTL5
Methyltransferase-like protein 5.
      
 0.872
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein isoform X1.
      
 0.861
METTL1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
  
 0.765
AASDH
acyl-CoA synthetase family member 4 isoform X1.
   
    0.757
METTL14
N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family.
   
  
 0.716
NOL6
Nucleolar protein 6.
   
    0.710
GPN3
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
    0.685
MGA
MAX gene-associated protein isoform X1.
   
    0.685
MRPL2
39S ribosomal protein L2, mitochondrial.
   
    0.685
COG3
Conserved oligomeric Golgi complex subunit 3 isoform X1.
   
    0.685
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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