STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL2839S ribosomal protein L28, mitochondrial. (256 aa)    
Predicted Functional Partners:
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
    
 
 0.984
MRPL9
39S ribosomal protein L9, mitochondrial.
   
   0.982
LOC101371433
39S ribosomal protein L15, mitochondrial.
   
   0.971
MRPL15
39S ribosomal protein L15, mitochondrial.
   
   0.971
MRPS26
28S ribosomal protein S26, mitochondrial.
   
 
 0.951
MRPL12
39S ribosomal protein L12, mitochondrial isoform X2.
   
 
 0.944
MRPS34
28S ribosomal protein S34, mitochondrial isoform X1.
   
   0.940
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.939
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.925
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
   0.924
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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