STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)    
Predicted Functional Partners:
CCNH
cyclin-H isoform X1; Belongs to the cyclin family.
    
 0.999
MNAT1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
   
 0.998
GTF2B
Transcription initiation factor IIB.
   
 0.976
GTF2H3
General transcription factor IIH subunit 3.
   
 0.969
ERCC2
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.964
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit.
    
 0.964
GTF2H5
General transcription factor IIH subunit 5.
    
 0.964
GTF2H1
General transcription factor IIH subunit 1 isoform X1.
   
 0.961
CDK1
Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily.
  
0.957
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.952
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.