STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85ACoiled-coil domain-containing protein 85A isoform X1. (546 aa)    
Predicted Functional Partners:
ARHGAP21
Rho GTPase-activating protein 21.
    
 
 0.678
LY6H
Lymphocyte antigen 6H.
      
 0.617
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 
 0.537
CCDC88A
Girdin isoform X1.
      
 0.524
KIAA1841
Uncharacterized protein KIAA1841 homolog.
      
 0.523
LOC101383735
Olfactory receptor.
      
 0.523
SLC25A16
Graves disease carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.522
ETAA1
Ewing's tumor-associated antigen 1.
      
 0.522
RAB33B
Ras-related protein Rab-33B.
      
 0.522
FAM134B
Protein FAM134B isoform X1.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.