STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEAF1Deformed epidermal autoregulatory factor 1 homolog. (565 aa)    
Predicted Functional Partners:
HELZ
Probable helicase with zinc finger domain.
      
 0.621
TAPT1
Transmembrane anterior posterior transformation protein 1 homolog isoform X1.
      
 0.541
OSR1
Protein odd-skipped-related 1.
    
 
 0.537
SMYD1
Histone-lysine N-methyltransferase SMYD1.
   
 
 0.533
NFX1
Transcriptional repressor NF-X1 isoform X1.
      
 0.527
ZMYND10
Zinc finger MYND domain-containing protein 10; Plays a role in axonemal structure organization and motility. Involved in axonemal pre-assembly of inner and outer dynein arms (IDA and ODA, respectively) for proper axoneme building for cilia motility. May act by indirectly regulating transcription of dynein proteins. Belongs to the ZMYND10 family.
      
 0.525
LRRC6
Protein tilB homolog.
      
 0.525
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
      
 0.522
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
    
 
 0.481
DDX10
RNA helicase.
    
 
 0.473
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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