STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT8LOW QUALITY PROTEIN: synaptotagmin-8. (504 aa)    
Predicted Functional Partners:
KLHL14
Kelch-like protein 14.
      
 0.707
ITSN2
Intersectin-2.
     
 0.618
STON2
Stonin-2 isoform X1; Belongs to the Stoned B family.
   
 0.598
RAB3D
Ras-related protein Rab-3D.
   
 0.573
VAMP5
Vesicle-associated membrane protein 5.
   
 0.570
VAMP2
Vesicle-associated membrane protein 2 isoform X1.
   
 0.563
VAMP8
Vesicle-associated membrane protein 8.
   
 0.556
STX11
Syntaxin-11; Belongs to the syntaxin family.
    
 0.550
VAMP3
Vesicle-associated membrane protein 3.
   
 0.545
VAMP4
Vesicle-associated membrane protein 4 isoform X1.
   
 0.538
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.