STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin-conjugating enzyme E2 J1. (318 aa)    
Predicted Functional Partners:
LOC101364011
Ubiquitin-conjugating enzyme E2 variant 1 isoform X2.
   
 0.922
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1 isoform X1.
   
 0.922
SEL1L
Protein sel-1 homolog 1.
    
 
 0.812
SYVN1
E3 ubiquitin-protein ligase synoviolin.
    
 
 0.794
UBE2G2
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
   
0.791
UBE2S
Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.772
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2 isoform X1.
   
 0.756
PIGZ
Mannosyltransferase.
      
 0.756
RNF170
E3 ubiquitin-protein ligase RNF170 isoform X1.
    
 
 0.752
AMFR
E3 ubiquitin-protein ligase AMFR.
    
 
 0.748
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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