STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR45BWD repeat domain phosphoinositide-interacting protein 3. (344 aa)    
Predicted Functional Partners:
RAB40B
Ras-related protein Rab-40B isoform X1.
 
 
  
 0.808
LOC101368868
UPF0183 protein C16orf70 homolog.
   
  
 0.768
BCAS3
Breast carcinoma-amplified sequence 3 isoform X1.
   
  
 0.743
WIPI1
WD repeat domain phosphoinositide-interacting protein 1 isoform X1.
   
0.733
RAB40C
Ras-related protein Rab-40C isoform X1.
 
 
  
 0.730
ZFYVE1
Zinc finger FYVE domain-containing protein 1 isoform X1.
    
 
 0.673
PEX1
Peroxisome biogenesis factor 1 isoform X1.
    
 
 0.659
SGSM2
Small G protein signaling modulator 2 isoform X1.
      
 0.618
ATG2A
Autophagy-related protein 2 homolog A.
    
 
 0.575
ATG2B
Autophagy-related protein 2 homolog B.
    
 
 0.563
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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