STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM4Tropomyosin alpha-4 chain isoform X1; Belongs to the tropomyosin family. (284 aa)    
Predicted Functional Partners:
TNNT2
Troponin T, cardiac muscle isoform X1.
   
 0.973
TNNI3
Troponin I, cardiac muscle.
   
 0.970
ACTC1
Actin, alpha cardiac muscle 1 isoform X1.
   
 0.967
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 0.846
MYH6
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.838
MYH7
Myosin-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.838
TNNT3
Troponin T, fast skeletal muscle isoform X1.
   
 0.780
TNNT1
Troponin T, slow skeletal muscle isoform X1.
   
 0.750
TNNI1
Troponin I, slow skeletal muscle.
   
 0.745
SMIM20
Small integral membrane protein 20.
   
 0.740
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.