STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3E3 ubiquitin-protein ligase PDZRN3 isoform X1. (1069 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 0.763
RANGRF
Ran guanine nucleotide release factor isoform X1.
      
 0.730
UBOX5
RING finger protein 37 isoform X1.
      
 0.730
FCHSD2
F-BAR and double SH3 domains protein 2 isoform X1.
      
 0.729
EBPL
Emopamil-binding protein-like.
      
 0.711
SHQ1
Protein SHQ1 homolog.
      
 0.708
MIB2
E3 ubiquitin-protein ligase MIB2 isoform X1.
    
 0.685
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.672
GXYLT2
Glucoside xylosyltransferase 2.
      
 0.621
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
    
  0.612
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.