STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URB2Unhealthy ribosome biogenesis protein 2 homolog. (1521 aa)    
Predicted Functional Partners:
URB1
Nucleolar pre-ribosomal-associated protein 1.
   
  
 0.779
CAP2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.632
CAP1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.632
WDR1
WD repeat-containing protein 1 isoform X2.
   
 
 0.627
DDX31
RNA helicase.
   
  
 0.580
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.528
OSBPL7
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.518
TOR1AIP1
torsin-1A-interacting protein 1.
      
 0.518
SYCE1L
Synaptonemal complex central element protein 1-like.
      
 0.518
ZNF775
Zinc finger protein 775.
    
 
 0.518
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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