STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB4ARas-related protein Rab-4A. (218 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn-5.
    
 0.965
RUFY1
RUN and FYVE domain-containing protein 1 isoform X1.
    
 0.948
TBC1D16
LOW QUALITY PROTEIN: TBC1 domain family member 16.
    
 0.900
ITSN2
Intersectin-2.
    
 0.827
EEA1
Early endosome antigen 1.
    
 0.741
ITSN1
Intersectin-1 isoform X1.
    
 0.740
ARL5A
ADP-ribosylation factor-like protein 5A; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.623
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.622
MST1R
Macrophage-stimulating protein receptor isoform X1.
   
 0.617
MET
Hepatocyte growth factor receptor.
   
 0.617
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.