STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1Transcriptional protein SWT1. (1057 aa)    
Predicted Functional Partners:
TRMT1L
TRMT1-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.889
IVNS1ABP
Influenza virus NS1A-binding protein.
      
 0.829
RNF2
E3 ubiquitin-protein ligase RING2 isoform X1.
      
 0.766
TRIML2
Probable E3 ubiquitin-protein ligase TRIML2.
    
 
 0.722
AGTRAP
Type-1 angiotensin II receptor-associated protein isoform X1.
      
 0.712
DAND5
DAN domain family member 5.
      
 0.709
OPN3
Opsin-3; Belongs to the G-protein coupled receptor 1 family.
      
 0.701
RGS7
Regulator of G-protein signaling 7 isoform X1.
      
 0.669
GTF2H5
General transcription factor IIH subunit 5.
      
 0.638
ZNFX1
NFX1-type zinc finger-containing protein 1.
      
 0.622
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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