STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP112Centrosomal protein of 112 kDa. (955 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
    
 0.768
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.757
NEDD8
NEDD8.
   
 0.658
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
   
 0.607
UBC
polyubiquitin-C.
    
 0.568
LOC101386062
Ubiquitin-like.
    
 0.568
LOC101371369
Polyubiquitin.
    
 0.568
LOC101376426
Ubiquitin-like.
    
 0.568
SENP8
Sentrin-specific protease 8.
    
 0.557
ZFAND4
AN1-type zinc finger protein 4 isoform X1.
    
 0.513
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.