STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPTFNucleosome-remodeling factor subunit BPTF isoform X1. (3050 aa)    
Predicted Functional Partners:
NIPBL
Nipped-B protein.
   
    0.894
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
 
 0.855
SMARCA1
Probable global transcription activator SNF2L1 isoform X1.
   
 
 0.854
RSF1
Remodeling and spacing factor 1.
   
 
 0.823
PRRC2C
Protein PRRC2C.
   
  
 0.820
SETD2
Histone-lysine N-methyltransferase SETD2.
   
 
 0.804
ASH1L
Histone-lysine N-methyltransferase ASH1L.
   
 
0.797
ADNP
Activity-dependent neuroprotector homeobox protein.
   
  
 0.787
RBBP4
Histone-binding protein RBBP4.
    
 
 0.719
LOC101371079
Histone-binding protein RBBP4-like.
    
 
 0.719
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.