STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF13BTumor necrosis factor ligand superfamily member 13B isoform X1; Belongs to the tumor necrosis factor family. (289 aa)    
Predicted Functional Partners:
TNFRSF13C
Tumor necrosis factor receptor superfamily member 13C.
    
 0.998
TNFRSF17
Tumor necrosis factor receptor superfamily member 17.
    
 0.996
TNFRSF13B
Tumor necrosis factor receptor superfamily member 13B.
    
 0.985
LOC101365786
Tumor necrosis factor ligand superfamily member 13 isoform X1; Belongs to the tumor necrosis factor family.
   
 
0.808
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
   
 
 0.713
TNFSF11
Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.704
LTB
Lymphotoxin-beta isoform X1; Belongs to the tumor necrosis factor family.
   
 
 0.703
TNFSF12
Tumor necrosis factor ligand superfamily member 12; Belongs to the tumor necrosis factor family.
   
 0.693
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.660
LTBR
Tumor necrosis factor receptor superfamily member 3 isoform X1.
   
 0.658
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.