STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT72Keratin, type II cytoskeletal 72; Belongs to the intermediate filament family. (531 aa)    
Predicted Functional Partners:
DSG4
LOW QUALITY PROTEIN: desmoglein-4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.628
TGM5
Protein-glutamine gamma-glutamyltransferase 5.
      
 0.611
KRT71
Keratin, type II cytoskeletal 71; Belongs to the intermediate filament family.
  
 
 
0.544
KRT73
Keratin, type II cytoskeletal 73; Belongs to the intermediate filament family.
  
 
 
0.544
ACER1
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.542
LOC101372699
Keratin-associated protein 13-1-like.
   
  
 0.532
MYSM1
Histone H2A deubiquitinase MYSM1.
      
 0.527
NPY4R
Neuropeptide Y receptor type 4; Belongs to the G-protein coupled receptor 1 family.
      
 0.457
SPRR4
LOW QUALITY PROTEIN: small proline-rich protein 4.
      
 0.440
TMEM8A
Transmembrane protein 8A.
      
 0.437
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.