STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ1Synaptojanin-1 isoform X1. (1611 aa)    
Predicted Functional Partners:
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase isoform X1.
     
 0.946
OCRL
Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.
    
0.943
LOC101371002
Synaptojanin-2.
  
  
0.943
LOC101384695
Synaptojanin-2.
     
0.942
INPP5B
LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.
    
0.941
PIP5K1A
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1.
    
 0.937
INPP5E
72 kDa inositol polyphosphate 5-phosphatase.
    
0.930
SACM1L
Phosphatidylinositide phosphatase SAC1 isoform X1.
    
0.925
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
     
 0.924
PIP5K1C
Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1.
    
 0.918
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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