STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOD1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (154 aa)    
Predicted Functional Partners:
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.985
CCS
Copper chaperone for superoxide dismutase.
 
0.973
BCL2
Apoptosis regulator Bcl-2.
    
 0.971
LOC101382057
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.971
LOC101368415
Protein C9orf72 homolog.
      
 0.954
PARK7
Protein deglycase DJ-1.
  
 0.953
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
     
 0.950
HSPA5
78 kDa glucose-regulated protein isoform X1; Belongs to the heat shock protein 70 family.
   
 0.942
VDAC1
Voltage-dependent anion-selective channel protein 1 isoform X1.
   
 
 0.927
NEFL
Neurofilament light polypeptide isoform X1; Belongs to the intermediate filament family.
     
 0.917
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.