STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB5LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 5. (472 aa)    
Predicted Functional Partners:
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.734
TCEB2
Transcription elongation factor B polypeptide 2.
    
 0.693
MRVI1
Protein MRVI1 isoform X1.
    
 0.679
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 
 0.638
PTPRD
Receptor-type tyrosine-protein phosphatase delta isoform X1.
   
 
 0.628
WDR17
WD repeat-containing protein 17 isoform X1.
   
 
 0.627
LOC101378315
Bcl10-interacting CARD protein isoform X1.
      
 0.621
ABTB1
Ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1.
      
 0.621
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.608
ASB6
Ankyrin repeat and SOCS box protein 6 isoform X1.
  
 
 0.603
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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