STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDP2tyrosyl-DNA phosphodiesterase 2. (358 aa)    
Predicted Functional Partners:
TDP1
tyrosyl-DNA phosphodiesterase 1.
   
  
 0.765
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 
 0.730
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
    
   0.729
KLHL17
Kelch-like protein 17.
      
 0.655
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
      
 0.643
YPEL3
Protein yippee-like; Belongs to the yippee family.
      
 0.643
MLH3
DNA mismatch repair protein Mlh3.
      
 0.638
RAD23A
UV excision repair protein RAD23 homolog A isoform X1.
    
 
 0.628
SPRTN
sprT-like domain-containing protein Spartan.
      
 0.622
ZNF398
Zinc finger protein 398.
      
 0.620
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.