STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H1Prolyl 3-hydroxylase 1. (736 aa)    
Predicted Functional Partners:
CRTAP
Cartilage-associated protein.
   
0.959
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.931
P3H4
LOW QUALITY PROTEIN: synaptonemal complex protein SC65.
   
0.745
TMEM38B
Trimeric intracellular cation channel type B.
      
 0.604
LOC101365815
LOW QUALITY PROTEIN: solute carrier family 2, facilitated glucose transporter member 3-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.601
LOC101372009
Solute carrier family 2, facilitated glucose transporter member 3-like isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.601
COL1A1
Collagen alpha-1(I) chain.
   
 0.588
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 
 0.585
P4HB
Protein disulfide-isomerase.
   
 0.571
FKBP10
Peptidylprolyl isomerase.
   
  
 0.565
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.