STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL6Peptidyl-prolyl cis-trans isomerase-like 6 isoform X1. (311 aa)    
Predicted Functional Partners:
SYF2
pre-mRNA-splicing factor SYF2.
    
 0.845
RANBP1
Ran-specific GTPase-activating protein isoform X1.
 
 
 0.812
RSPH3
Radial spoke head protein 3 homolog.
  
 
 0.743
ATAD5
ATPase family AAA domain-containing protein 5.
   
  
 0.722
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.630
SNW1
SNW domain-containing protein 1 isoform X1.
    
 0.627
ZBTB24
Zinc finger and BTB domain-containing protein 24.
    
 
 0.627
NUP155
Nuclear pore complex protein Nup155.
   
 0.623
PRPF19
pre-mRNA-processing factor 19.
    
 0.623
XAB2
pre-mRNA-splicing factor SYF1.
   
 0.623
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.