STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS8Vacuolar protein sorting-associated protein 8 homolog isoform X1. (1428 aa)    
Predicted Functional Partners:
VPS11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 
 0.987
VPS18
Vacuolar protein sorting-associated protein 18 homolog.
    
 
 0.985
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.984
VPS39
vam6/Vps39-like protein isoform X1.
   
 
 0.955
TGFBRAP1
Transforming growth factor-beta receptor-associated protein 1.
   
 
 0.944
VPS33A
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.940
VPS33B
Vacuolar protein sorting-associated protein 33B isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.919
CCZ1
Vacuolar fusion protein CCZ1 homolog.
      
 0.760
VAC14
Protein VAC14 homolog.
   
  
 0.738
RAB5C
Ras-related protein Rab-5C isoform X1.
    
 
 0.716
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.