STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101372008Melanoma-associated antigen F1. (325 aa)    
Predicted Functional Partners:
NSMCE1
Non-structural maintenance of chromosomes element 1 homolog isoform X1.
   
 0.843
SMC5
Structural maintenance of chromosomes protein 5.
   
 0.787
NSMCE2
E3 SUMO-protein ligase NSE2.
    
 0.779
SMC6
Structural maintenance of chromosomes protein 6.
   
 0.760
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.753
EID3
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.753
EID1
EP300-interacting inhibitor of differentiation 1.
    
 
 0.590
PCF11
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
   
 
 0.559
LNX1
E3 ubiquitin-protein ligase LNX isoform X1.
   
 
 0.531
MMS19
MMS19 nucleotide excision repair protein homolog isoform X1.
    
 
 0.472
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.