STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La-related protein 7. (609 aa)    
Predicted Functional Partners:
MEPCE
7SK snRNA methylphosphate capping enzyme.
    
 
 0.998
HEXIM1
Protein HEXIM1.
    
 
 0.969
CDK9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.938
HEXIM2
LOW QUALITY PROTEIN: protein HEXIM2.
    
 
 0.908
CCNT1
cyclin-T1 isoform X1; Belongs to the cyclin family.
   
 0.897
TBC1D2B
TBC1 domain family member 2B.
      
 0.763
CCNT2
cyclin-T2 isoform X1; Belongs to the cyclin family.
   
 0.759
AFF4
AF4/FMR2 family member 4.
    
 0.730
NELFE
Negative elongation factor E isoform X1.
      
 0.720
DDX18
RNA helicase.
   
 0.691
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.