STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP18LOW QUALITY PROTEIN: ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family. (375 aa)    
Predicted Functional Partners:
ISG15
Ubiquitin-like protein ISG15.
   
 0.988
IFNAR2
Interferon alpha/beta receptor 2.
    
 0.968
RTP4
Receptor-transporting protein 4.
   
  
 0.922
DDX58
Probable ATP-dependent RNA helicase DDX58.
   
 
 0.912
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.909
IRF7
Interferon regulatory factor 7 isoform X1.
   
 0.897
IFI44
LOW QUALITY PROTEIN: interferon-induced protein 44.
   
  
 0.891
DHX58
Probable ATP-dependent RNA helicase DHX58.
   
 
 0.882
MX1
Interferon-induced GTP-binding protein Mx1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.875
MX2
Interferon-induced GTP-binding protein Mx2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.875
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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