STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosome-associated membrane glycoprotein 2 isoform X1. (412 aa)    
Predicted Functional Partners:
LAMP1
Lysosome-associated membrane glycoprotein 1 isoform X1.
  
0.994
EEA1
Early endosome antigen 1.
      
 0.928
CTSD
Cathepsin D isoform X1; Belongs to the peptidase A1 family.
   
 
 0.862
BECN1
Beclin-1.
      
 0.806
CD63
Tetraspanin.
    
 0.789
MTOR
Serine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.706
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 
 0.663
LGALS3
Galectin.
   
 0.627
RAB7A
Ras-related protein Rab-7a.
   
  
 0.624
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.620
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.