STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUSP13Dual specificity protein phosphatase 13 isoform X1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (327 aa)    
Predicted Functional Partners:
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 
 0.733
AP3M1
AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 
 0.728
TPPP
Tubulin polymerization-promoting protein.
   
  
 0.607
SAMD8
Sphingomyelin synthase-related protein 1.
      
 0.522
VRK3
Inactive serine/threonine-protein kinase VRK3.
    
 0.512
SMIM12
Small integral membrane protein 12.
   
 
 0.503
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
  
 0.492
UTP15
U3 small nucleolar RNA-associated protein 15 homolog isoform X1.
   
  
 0.490
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein.
   
    0.489
MRM1
rRNA methyltransferase 1, mitochondrial.
  
  
 0.471
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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