STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF187E3 ubiquitin-protein ligase RNF187. (362 aa)    
Predicted Functional Partners:
ANGEL1
Protein angel homolog 1.
      
 0.705
EIF4H
Eukaryotic translation initiation factor 4H isoform X1.
   
 
 0.630
ELF3
ETS-related transcription factor Elf-3.
      
 0.615
TRIM44
Tripartite motif-containing protein 44.
    
 
 0.555
PKDCC
Extracellular tyrosine-protein kinase PKDCC.
    
 0.539
RAMP3
Receptor activity-modifying protein 3.
      
 0.527
LGALS8
Galectin.
    
 
 0.525
SLC35B2
Adenosine 3'-phospho 5'-phosphosulfate transporter 1 isoform X2.
      
 0.521
MAP4K2
Non-specific serine/threonine protein kinase; May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.
      
 0.518
DCAF4
DDB1- and CUL4-associated factor 4 isoform X1.
    
 
 0.516
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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