STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOGLOtogelin-like protein. (2344 aa)    
Predicted Functional Partners:
PTPRQ
Phosphatidylinositol phosphatase PTPRQ.
 
 
 0.766
ZNF214
Zinc finger protein 214 isoform X1.
    
 
 0.706
LOC101382487
LOW QUALITY PROTEIN: uncharacterized protein C1orf105 homolog.
      
 0.705
GP1BA
Platelet glycoprotein Ib alpha chain.
    
 0.671
EMC2
ER membrane protein complex subunit 2 isoform X1.
      
 0.664
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
LOC105757892
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
LOC105758044
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
CEACAM16
Carcinoembryonic antigen-related cell adhesion molecule 16.
   
 0.620
GLE1
Nucleoporin GLE1.
   
 0.617
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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