STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT1Synaptotagmin-1 isoform X1. (422 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.965
VAMP2
Vesicle-associated membrane protein 2 isoform X1.
   
 0.960
RAB3A
Ras-related protein Rab-3A.
   
 0.891
SLC17A7
Vesicular glutamate transporter 1.
   
 
 0.874
STON2
Stonin-2 isoform X1; Belongs to the Stoned B family.
   
 0.859
VAMP1
Vesicle-associated membrane protein 1 isoform X1.
   
 0.855
SLC18A3
Vesicular acetylcholine transporter.
     
 0.829
DNAJC5
dnaJ homolog subfamily C member 5.
   
 0.803
VAMP3
Vesicle-associated membrane protein 3.
   
 0.796
SLC32A1
Vesicular inhibitory amino acid transporter.
   
 
 0.794
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.