STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LTumor protein p63-regulated gene 1-like protein. (268 aa)    
Predicted Functional Partners:
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.842
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.753
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.753
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.732
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.677
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.642
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
 0.642
ABCF1
ATP-binding cassette sub-family F member 1 isoform X1.
   
  
 0.636
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.620
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.617
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.