STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101385115ETS translocation variant 3-like protein. (408 aa)    
Predicted Functional Partners:
SCAF1
Splicing factor, arginine/serine-rich 19.
   
    0.800
HSPB3
Heat shock protein beta-3; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.527
DNAJC12
dnaJ homolog subfamily C member 12.
      
 0.526
CABP1
Calcium-binding protein 1 isoform X1.
      
 0.522
ING2
Inhibitor of growth protein.
      
 0.453
SUB1
Activated RNA polymerase II transcriptional coactivator p15 isoform X1.
   
  
 0.451
GTF2A1L
TFIIA-alpha and beta-like factor isoform X1.
   
  
 0.442
BLVRA
Biliverdin reductase A; Reduces the gamma-methene bridge of the open tetrapyrrole, biliverdin IX alpha, to bilirubin with the concomitant oxidation of a NADH or NADPH cofactor; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily.
   
  
 0.441
RUNX3
Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.
   
 0.433
RUNX2
Runt-related transcription factor 2 isoform X2.
   
 0.433
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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