STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM7Complex III assembly factor LYRM7; Belongs to the complex I LYR family. (104 aa)    
Predicted Functional Partners:
LOC101378109
Ubiquinol-cytochrome-c reductase complex assembly factor 1 isoform X1.
   
 
 0.871
UBXN7
UBX domain-containing protein 7.
    
   0.808
TTC19
Tetratricopeptide repeat protein 19, mitochondrial.
      
 0.802
LOC101372781
Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.
    
 
 0.792
LOC101375602
LOW QUALITY PROTEIN: cytochrome c oxidase assembly factor 4 homolog, mitochondrial.
      
 0.775
LOC101381163
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.750
LOC101375332
Ubiquinol-cytochrome-c reductase complex assembly factor 3.
      
 0.722
SDHAF4
Succinate dehydrogenase assembly factor 4, mitochondrial.
      
 0.696
TMEM209
Transmembrane protein 209.
      
 0.676
MRPL27
39S ribosomal protein L27, mitochondrial isoform X1.
   
 
 0.653
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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