STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM4PDZ and LIM domain protein 4 isoform X1. (331 aa)    
Predicted Functional Partners:
SH2B2
LOW QUALITY PROTEIN: SH2B adapter protein 2.
    
 
 0.619
PRSS23
Serine protease 23 isoform X1.
      
 0.615
NUDT14
Uridine diphosphate glucose pyrophosphatase.
      
 0.606
STOML2
Stomatin-like protein 2, mitochondrial isoform X1.
      
 0.599
LIMK2
LIM domain kinase 2 isoform X1.
    
 0.573
C2CD5
C2 domain-containing protein 5 isoform X1.
      
 0.540
PPAP2C
Lipid phosphate phosphohydrolase 2.
    
 
 0.536
ACER1
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
  
 0.529
ZNHIT1
Zinc finger HIT domain-containing protein 1.
      
 0.529
TMEM87B
Transmembrane protein 87B.
      
 0.528
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.