STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Protein Shroom1. (855 aa)    
Predicted Functional Partners:
SLC36A3
Proton-coupled amino acid transporter 3.
      
 0.817
AFF1
AF4/FMR2 family member 1.
      
 0.652
CCNI
cyclin-I; Belongs to the cyclin family.
      
 0.526
GRXCR2
Glutaredoxin domain-containing cysteine-rich protein 2.
      
 0.525
CABP2
Calcium-binding protein 2.
      
 0.523
GRXCR1
Glutaredoxin domain-containing cysteine-rich protein 1.
      
 0.523
CEACAM16
Carcinoembryonic antigen-related cell adhesion molecule 16.
      
 0.523
RGAG1
Retrotransposon gag domain-containing protein 1.
  
     0.513
VSTM4
V-set and transmembrane domain-containing protein 4.
      
 0.499
EPB41L5
Band 4.1-like protein 5.
      
 0.497
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.