STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF6DDB1- and CUL4-associated factor 6 isoform X1. (950 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1 isoform X1.
    
 0.976
DCAF4
DDB1- and CUL4-associated factor 4 isoform X1.
     
 0.966
DCAF12
DDB1- and CUL4-associated factor 12.
      
 0.896
DDB2
DNA damage-binding protein 2 isoform X1.
    
 0.894
DCAF5
DDB1- and CUL4-associated factor 5 isoform X1.
   
 
0.889
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
      
 0.763
CUL4A
cullin-4A; Belongs to the cullin family.
   
 0.734
TRPC4AP
Short transient receptor potential channel 4-associated protein isoform X1.
    
 
 0.725
CUL4B
cullin-4B; Belongs to the cullin family.
   
 0.700
RBX1
E3 ubiquitin-protein ligase RBX1 isoform X1.
    
 0.671
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.