STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BASP1Brain acid soluble protein 1. (219 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
      
 0.612
MARCKS
Myristoylated alanine-rich C-kinase substrate.
   
 0.604
SGIP1
SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1.
      
 0.602
RHOF
Rho-related GTP-binding protein RhoF.
    
 0.546
LMNTD2
Lamin tail domain-containing protein 2.
    
 0.544
WT1
Wilms tumor protein isoform X1.
      
 0.523
FOXF1
Forkhead box protein F1.
      
 0.522
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
      
 0.522
MARCKSL1
MARCKS-related protein.
   
  
 0.508
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.480
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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