STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM4V-set and transmembrane domain-containing protein 4. (319 aa)    
Predicted Functional Partners:
LSAMP
Limbic system-associated membrane protein isoform X1.
    
 0.545
SHROOM1
Protein Shroom1.
      
 0.499
MSANTD4
myb/SANT-like DNA-binding domain-containing protein 4.
   
 0.482
LGALS12
Galectin.
    
 
 0.477
SLC37A2
Sugar phosphate exchanger 2.
    
 
 0.464
NYAP2
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2.
    
 
 0.454
RRP15
RRP15-like protein.
      
 0.450
GPR22
Probable G-protein coupled receptor 22.
     
 0.437
TFAP2D
Transcription factor AP-2-delta isoform X1.
      
 0.435
NCS1
Neuronal calcium sensor 1.
    
 0.414
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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