STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIAH3E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (267 aa)    
Predicted Functional Partners:
SLC52A2
Solute carrier family 52, riboflavin transporter, member 2.
      
 0.662
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
      
 0.617
CACYBP
Calcyclin-binding protein isoform X1.
    
 
 0.604
BAG4
BAG family molecular chaperone regulator 4 isoform X1.
      
 0.523
KIAA0408
Uncharacterized protein KIAA0408 homolog.
      
 0.522
DNAJC12
dnaJ homolog subfamily C member 12.
      
 0.521
SLC24A4
Sodium/potassium/calcium exchanger 4 isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.450
THSD7A
Thrombospondin type-1 domain-containing protein 7A.
      
 0.450
E2F7
Transcription factor E2F7.
      
 0.443
GMDS
GDP-mannose 4,6 dehydratase.
      
 0.442
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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