STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDFY4WD repeat- and FYVE domain-containing protein 4. (3185 aa)    
Predicted Functional Partners:
LRRC18
Leucine-rich repeat-containing protein 18.
    
 
 0.716
SNX22
Sorting nexin-22 isoform X1.
      
 0.700
WDFY2
WD repeat and FYVE domain-containing protein 2.
   
  
 0.699
SLA2
Src-like-adapter 2.
   
 
 0.695
LAPTM5
Lysosomal-associated transmembrane protein 5 isoform X1.
   
  
 0.640
TDRD6
Tudor domain-containing protein 6 isoform X1.
      
 0.616
ARHGAP27
LOW QUALITY PROTEIN: rho GTPase-activating protein 27.
   
 
 0.569
RCCD1
RCC1 domain-containing protein 1.
   
 
 0.550
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.547
IFI30
Gamma-interferon-inducible lysosomal thiol reductase.
    
 
 0.541
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.