STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM21AWASH complex subunit FAM21A. (1323 aa)    
Predicted Functional Partners:
LOC101373485
WAS protein family homolog 1.
    
 
 0.740
KIAA0196
WASH complex subunit strumpellin isoform X1.
   
 
 0.731
CCDC53
WASH complex subunit CCDC53 isoform X1.
    
 
 0.710
KIAA1033
WASH complex subunit 7 isoform X1.
   
 
 0.692
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.608
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.599
ANKRD32
Ankyrin repeat domain-containing protein 32 isoform X1.
    
 
 0.559
LRRC42
Leucine-rich repeat-containing protein 42.
      
 0.522
PPP1R14D
Protein phosphatase 1 regulatory subunit 14D isoform X1.
      
 0.518
ZFAND4
AN1-type zinc finger protein 4 isoform X1.
 
    
 0.511
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.