STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC90BCoiled-coil domain-containing protein 90B, mitochondrial. (320 aa)    
Predicted Functional Partners:
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
      
 0.812
ANKRD42
Ankyrin repeat domain-containing protein 42 isoform X1.
      
 0.802
FAM32A
Protein FAM32A.
   
  
 0.769
RAB30
Ras-related protein Rab-30.
      
 0.741
MRPL53
39S ribosomal protein L53, mitochondrial.
      
 0.657
NIPAL2
NIPA-like protein 2.
      
 0.657
PCF11
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
      
 0.622
WDR74
WD repeat-containing protein 74 isoform X1.
      
 0.615
IGSF22
Immunoglobulin superfamily member 22.
      
 0.523
LRRC66
Leucine-rich repeat-containing protein 66.
      
 0.523
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.